Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015816489.1_cds_XP_016498829.1_12811
CDS Infomation

[gene=LOC107817495] [db_xref=GeneID:107817495] [protein=probable copper-transporting ATPase HMA5 isoform X2] [protein_id=XP_016498829.1] [location=join(32420..32728,34329..35720,35804..36058,36147..36269,36820..37299,37994..38413)] [gbkey=CDS]
Sequence

ATGGCGACTGCTAAGTTTTTTTCATTTGCGTGTCTAAGAAATGAGAGCAGTAATTATGGA
GAATTATCACCAAAACCACATTATCCATCAATGCCTAAATATCCAAAGGGTGTTTCTGTA
TCTACAGATGAAGAGAAAAGTATACATGGAACCGAATCAAAGGCAGTTTTTTCAGTTAAT
GGGATGAGTTGTTCTGCATGTGCTGGATCTGTTGAAAAGGCAATTAAAAGACTTCCTGGG
ATTAAAGAAGCTGTTGTTGATGTACTGAATAACAAAGCTCAAGTTATTTTTTACTCCACC
TTTGTCGATGAGGAAATGATCCGCGAGACCATAAAAGATGTTGGATTCGAGACAACACTG
ATTACAGAGGAGACAAATGAAAAAACCTCCCAAGTCTGCCGGATACGTATAAAAGGTATG
ACCTGCACTTCTTGCTCCACAACAGTTGAATCTGCTTTGCAGTTGATCCCCGGCGTACAG
AAAGCACAAGTTGCATTAGCAACCGAAGAGGCTGAAATCCAATATGATCCGAGGATATTA
ACTTACAGTCAGCTTTTAAAAGCCATAGAAGATACTGGATTTGAAGCCATATTAATTAGC
ACAGGAGAAGATAGGAGCAAAATATTGCTGAAAGTTGATGGAGTATTCACTGAAGATTCA
ATGAGGATTATTGAAAGTTCTCTTAGAGCACTCTCGGGCATTGAAGACATTGATATTGAT
CCTGAACTGAAGAAGTTATCCATTTCTTATAAATCAGATATAATAGGACCTAGAAATTTT
ATTCAAGTAATTGAGTCAACTGGTTCTGGAGAGTTCAAGGCAATGATATTTCCGGAAGGA
GATGGGAAACAATCCCATAGACAAGAAGAAATCGAACACTATCGTCAGTCCTTTCTCTGG
AGCTTGGTTTTTACCATTCCGGTTTTCTTGACCTCCATGGTCTTCATGTATATTCCTGGT
CTGAAGGATGGATTGGATATTAAAGTTGTCAACATGCTTAGCATTGGTGAGATTTTGCGC
TGGGTGCTCTCTACTCCCGTGCAATTCATCATTGGCCGACATTTCTACTCTGGTTCTTAC
AAAGCACTACGTCATGGTTCTGCAAACATGGATGTTCTGATTGCTTTGGGAACAAATGCA
GCCTACTTTTATTCTGTCTACTCGGTGTTGAGAGCTGCAACTTCTCCAAGCTTCAAGTCT
ACTGATTTTTTTGAGACCAGCTCAATGCTCATTTCCTTCATTCTACTTGGGAAGTATCTT
GAAGTTTTGGCCAAAGGAAAAACATCCGAGGCTATTGCTAAGCTCATGAACTTGGCCCCT
GAGACAGCAACACTATTACAGTTTGATGACGAAGGGAATGTGGTGAAAGAGGAAGAAATT
GATAGCCGACTGATACGGAAGAACGATGTGATCAGAATCCTTCCTGGTGCAAAAGTAGCC
TGTGATGGTTTTGTCATCTGGGGACAAAGCCACGTGAATGAGAGCATGATAACTGGAGAA
TCTCGGCCAGTGGCCAAAAGGAAAGGCGATACGGTGATTGGAGGAACTGTGAATGAGAAT
GGTGTTCTGCATATTAGAGCTACTAAAGTTGGATCAGAGAGTGCTCTTTCACAGATTGTT
CAGCTGGTTGAATCAGCACAAATGGCTAAAGCTCCTGTTCAAAAATTTGCTGATCGTATT
TCTAAATATTTTGTGCCTCTTGTTATTATTCTCTCCTTTTCCACTTGGCTGGCCTGGTAT
TTATCTGGGAAGTACAACAGCTATCCTAAATCCTGGATTCCGTCTTCTATTGATAGTTTT
CAGCTTGCCCTTCAATTTGGTATATCTGTTATGGTTATAGCTTGCCCGTGTGCTCTTGGT
CTTGCTACTCCAACTGCTGTAATGGTTGGCACAGGAGTTGGTGCTTCTCGAGGTGTTCTT
ATTAAAGGCGGGCAGGCTTTGGAAAGCGCACAAAAGGTGAACTGTATAGTGTTTGATAAG
ACGGGGACTCTTACAATGGGCAAACCAGTCGTTGTAAATACTAAGCTTTTCAGATCTATG
GTACTTCGAGAGTTTTACGAATTGGTTGCTGCAGCTGAGGTAAATAGCGAGCATCCCTTG
GCCAAGGCAATTGTTGAATATGCTAAAAAGTTTAGAGAGGATGAGGAGAATCCTGTGTGG
CCTGAAGCCGAGGACTTTGAGTCTATAACTGGCCACGGTGTGAAGGCTGTTATCCACAAC
AAAAAAGTAATAGTTGGAAACAAGAGGTTGATGTTAGAGCAAGGCATTTCTGTTCCTGTT
GATGCCGATGAAGTACTAGCAGAAGCAGAAGAATTGGCTCAAACTGGAATTCTTGTATCA
ATTGATAGTGAACTGATTGGTGTTGTTGCTATATCTGATCCAGTGAAGCCTGGAGCTCGT
GAAGTCGTTTCTCTTCTTAAGTCTATGAATGTTGAGAGTAAGCTAGTAACAGGTGACAAT
TGGGGAACAGCTAATGCCATTGCCAAGGAAGTTGGCATTAACGATGTTATCGCAGAAGCA
AAACCTGAAGACAAAGCAGAAAAAGTGAAGGAACTACAGAGTTTGGGAAAAGTTGTTGCA
ATGGTGGGAGATGGAATTAACGACTCGCCAGCGCTTGTAGCAGCAGATGTTGGAATGGCA
ATAGGTGCAGGGACAGATATAGCTATTGAGGCAGCTGATATTGTCCTAATGAAAAGCAAT
CTTGAAGATGTCATAACTGCTATTGATCTTTCCAGGAAAACTTTTGGCCGAATTCGCCTG
AACTACTTTTGGGCATTTGGCTATAACCTTCTTGGCATCCCTATTGCTGCCGGAGCTCTT
TTCCCGTTTACTAGATTTCGTTTGCCGCCGTGGGTAGCAGGAGCAGCAATGGCTGCCTCT
TCAGTAAGTGTTGTCTGCAGCTCTCTTTTGCTGAAGAATTACAAGAGGCCAAAGCAGCTT
GATAACCTTGAAATTGGAGGCATAACTATTGAGTCCTAA

Peptide Sequence

PEP ID

XP_016498829.1
PEP Infomation

PREDICTED: probable copper-transporting ATPase HMA5 isoform X2 [Nicotiana tabacum]
Sequence

MATAKFFSFACLRNESSNYGELSPKPHYPSMPKYPKGVSVSTDEEKSIHGTESKAVFSVN
GMSCSACAGSVEKAIKRLPGIKEAVVDVLNNKAQVIFYSTFVDEEMIRETIKDVGFETTL
ITEETNEKTSQVCRIRIKGMTCTSCSTTVESALQLIPGVQKAQVALATEEAEIQYDPRIL
TYSQLLKAIEDTGFEAILISTGEDRSKILLKVDGVFTEDSMRIIESSLRALSGIEDIDID
PELKKLSISYKSDIIGPRNFIQVIESTGSGEFKAMIFPEGDGKQSHRQEEIEHYRQSFLW
SLVFTIPVFLTSMVFMYIPGLKDGLDIKVVNMLSIGEILRWVLSTPVQFIIGRHFYSGSY
KALRHGSANMDVLIALGTNAAYFYSVYSVLRAATSPSFKSTDFFETSSMLISFILLGKYL
EVLAKGKTSEAIAKLMNLAPETATLLQFDDEGNVVKEEEIDSRLIRKNDVIRILPGAKVA
CDGFVIWGQSHVNESMITGESRPVAKRKGDTVIGGTVNENGVLHIRATKVGSESALSQIV
QLVESAQMAKAPVQKFADRISKYFVPLVIILSFSTWLAWYLSGKYNSYPKSWIPSSIDSF
QLALQFGISVMVIACPCALGLATPTAVMVGTGVGASRGVLIKGGQALESAQKVNCIVFDK
TGTLTMGKPVVVNTKLFRSMVLREFYELVAAAEVNSEHPLAKAIVEYAKKFREDEENPVW
PEAEDFESITGHGVKAVIHNKKVIVGNKRLMLEQGISVPVDADEVLAEAEELAQTGILVS
IDSELIGVVAISDPVKPGAREVVSLLKSMNVESKLVTGDNWGTANAIAKEVGINDVIAEA
KPEDKAEKVKELQSLGKVVAMVGDGINDSPALVAADVGMAIGAGTDIAIEAADIVLMKSN
LEDVITAIDLSRKTFGRIRLNYFWAFGYNLLGIPIAAGALFPFTRFRLPPWVAGAAMAAS
SVSVVCSSLLLKNYKRPKQLDNLEIGGITIES

Transcript Sequence

Gene sequence data has not been registered.